seqdatabase.ini

VERSION=1.00

[embl] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=embl

[embl-upd] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=embl-upd

[embl_biofetch] protocol=biofetch location=http://www.ebi.ac.uk/cgi-bin/dbfetch dbname=embl

[embl_biosql] protocol=biosql location=localhost dbname=biosql driver=postgres user=hack pass= biodbname=embl

[embl_biocorba] protocol=bsane-corba location=sqldbsrv.ior

[embl_xembl] protocol=xembl location=http://www.ebi.ac.uk/xembl/XEMBL.wsdl format=Bsml

[embl_flat] protcol=flat location=/export/database/ dbname=embl

[genbank_bdb] protcol=flat location=/export/database/ dbname=genbank

[swissprot] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=swissprot

[swissprot-upd] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=swissprot-upd

[swissprot_biofetch] protocol=biofetch location=http://www.ebi.ac.uk/cgi-bin/dbfetch dbname=swall

[swissprot_biosql] protocol=biosql location=db.bioruby.org dbname=biosql driver=mysql user=root pass= biodbname=sp

[genbank] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=genbank

[genbank-upd] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=genbank-upd

[genbank_biosql] protocol=biosql location=db.bioruby.org dbname=biosql driver=mysql user=root pass= biodbname=gb

[refseq] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=refseq

[refseq_biosql] protocol=biosql location=db.bioruby.org dbname=biosql driver=mysql user= pass= biodbname=rs

[kegg-pathway] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=pathway

[kegg-genome] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=genome

[kegg-genes] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=genes

[kegg-vgenes] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=vgenes

[aaindex] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=aaindex

[blocks] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=blocks

[enzyme] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=enzyme

[epd] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=epd

[litdb] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=litdb

[omim] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=omim

[pdb] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=pdb

[pdbstr] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=pdbstr

[pfam] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=pfam

[pir] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=pir

[pmd] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=pmd

[prf] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=prf

[prints] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=prints

[prodom] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=prodom

[prosdoc] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=prosdoc

[prosite] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=prosite

[transfac] protocol=biofetch location=http://bioruby.org/cgi-bin/biofetch.rb dbname=transfac